Ensembl
This is a collection of modules to query the ensembl database.
Currently there are the following APIs covered:
| Submodule | Description |
|---|---|
search | Searches through descriptions on ENSEMBL |
database | Prints all available databases on Ensembl's SQL database |
lookup-id | Lookup information for genes/transcripts providing ensembl ids |
lookup-symbol | Lookup information for genes/transcripts providing symbols and species |
release | Retrieves the latest ensembl release version |
ref | Retrieves reference files from Ensembl FTP site |
species | Retrieves the list of species from ENSEMBL FTP site |