Tissue
Performs a tissue-correlation analysis using ARCHS4.
Arguments
| Name | Short | Long | Description |
|---|---|---|---|
| Species | -s | --species | species of organism to recover [default: human] [possible values: human, mous] |
| Output | -o | --output | optional filepath to write output to [default=stdout] |
Command Line Interface
# Find tissue-level expression for AP2S1 in Humans
ggetrs archs4 tissue AP2S1
# Find tissue-level expression for AP2S1 in Mice
ggetrs archs4 tissue -s mouse AP2S1
Python
import ggetrs
# perform a tissue-correlation analysis for AP2S1 in Humans
ggetrs.archs4.tissue("AP2S1", "human")
# perform a tissue-correlation analysis for AP2S1 in Mice
ggetrs.archs4.tissue("AP2S1", "mouse")