[ ggetrs ]

MIT licensed actions status codecov Crates.io docs.rs

Introduction

ggetrs is a free, open-source command-line tool that enables efficient querying of genomic databases. It consists of a collection of separate but interoperable modules, each designed to facilitate one type of database querying in a single line of code.

This is a rust reimplentation of the original python-based program gget and was rewritten to take advantage of rust's powerful HTTP and asynchronous functionality for a faster user experience.

There are some minor syntactic changes between function calls from the original gget and a description for each tool is provided on the modules page.

This tool is written fully in rust - but allows for a python interface using pyo3.

If you have questions please check out the FAQ

Installation

ggetrs can be installed easily using cargo.

See alternative methods and details for python installation

cargo install ggetrs

Module Overview

Here is a list of currently supported modules