[ fxtools unique
]
Summary
This is a command that will determine all unique sequences within a fastx file and split the records into either unique or duplicates. It will also count the number of unique/duplicate sequences/duplicate records and report those.
Parameters
By default all unique reads will be pushed to stdout unless piped to a file with the -o
flag.
Nulled reads will not be reported by default but can be written to a filepath with the -n
flag.
Usage
fxtools unique \
-i <input_fastx> \
-o <optional_output_file_for_unique> \
-n <optional_output_file_for_null>