BINSEQ: Addressing fundamental problems in sequence analysis

2025.04.20 :: {rust, bioinformatics, binseq} :: #parallel #rust #bioinformatics #binseq #grep

Brief overview of BINSEQ, how it addresses fundamental limitations of FASTQ, and an exploration of its performance benefits through a simple sequence grep example.

Introducing paraseq

2025.02.03 :: {rust, bioinformatics} :: #seq_io #parallel #rust #bioinformatics

A sequence parser built for native paired-end parallel processing

Releasing GIA v0.2

2024.05.01 :: {intervals} :: #gia #intervals #bioinformatics

Some release notes and thoughts on the next iteration of GIA